Veem v1.0

Matthews probability calculator — paste a beamline summary or drop an MTZ file

Paste crystallography output
load fixture:
or
MTZ file
🗂 Drop an .mtz file here, or click to browse
    Unit cell
    Space group
    Symbol —
    Number —
    Z —
    System —
    Calculation parameters
    resolution: useful range 1.2–3.5 Å  ·  blank = all-PDB distribution
    or calculate MW from sequence
    Paste a cell & space group, enter a molecular weight,
    and probabilities will appear here.
    Phase 1 acceptance tests
    Mission statement & references
    Veem is a browser-based reimplementation of MATTPROB. I wanted to enhance the user experience — no original science was performed by me personally. All scientific glory belongs to the authors listed below. — Jan Gebauer
    References
    1. Matthews, B.W. (1968) Solvent content of protein crystals. J. Mol. Biol. 33, 491–497. doi:10.1016/0022-2836(68)90205-2
    2. Kantardjieff, K.A. & Rupp, B. (2003) Matthews coefficient probabilities: improved estimates for unit cell contents of proteins, DNA, and protein–nucleic acid complex crystals. Protein Sci. 12, 1865–1871. doi:10.1110/ps.0350503
    3. Weichenberger, C.X. & Rupp, B. (2014) Ten years of probabilistic estimates of biocrystal solvent content: new insights via nonparametric kernel density estimate. Acta Cryst. D70, 1579–1588. doi:10.1107/S1399004714005550
    4. Weichenberger, C.X. & Rupp, B. (2015) MATTPROB: Matthews coefficient probabilities (developer summary, kernel method, P(n) prior table). Comput. Crystallogr. Newsl. 6, 14–19.